mo8it/AdvLabDB
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Code Releases Activity

Clean up before container setup

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This commit is contained in:
Mo 2022-08-02 13:59:26 +02:00
parent b6008c1d31
commit 8cbb0d0d50
9 changed files with 2 additions and 182 deletions

9
README.adoc
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@ -16,14 +16,7 @@ Assistants have a separate interface to set marks and schedule appointments with
== Status
The software is still in beta and under active development. Do not hesitate to open issues!
== Setup
To setup a server, see the link:docs/server_setup.adoc[setup documentation].
=== Logs
After setting up a server, logs related to AdvLabDB can be found in the directory `/var/log/advlabdb` on the server.
== Known issues
* Update scripts are not working.
// TODO: New setup with containers
== What does the name mean?
**Adv**anced **Lab** **D**ata**B**ase

16
advlabdb/scripts/maintain/root_update.py
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@ -1,16 +0,0 @@
from ..terminal_utils import box, run
from .shared import show_update_datetime
def main():
show_update_datetime()
box("Update system packages")
run("sudo apt update")
run("sudo apt upgrade -y")
run("sudo reboot")
if __name__ == "__main__":
main()

27
advlabdb/scripts/maintain/user_update.py
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@ -1,27 +0,0 @@
from ..setup.shared import LOCAL_BIN, REPO_DIR, install_latest_pipx, poetry_update
from ..terminal_utils import box, run
from .shared import show_update_datetime
def main():
show_update_datetime()
box("Upgrade pipx")
install_latest_pipx()
box("Upgrade pipx packages")
pipx_bin = LOCAL_BIN / "pipx"
run(f"{pipx_bin} upgrade-all --include-injected")
box("Backup database")
# TODO: Backup
box("Pull updates from the git repository")
run("git pull origin main", cwd=REPO_DIR)
box("Install latest Poetry packages")
poetry_update()
if __name__ == "__main__":
main()

9
advlabdb/scripts/setup/advlabdb.conf.template
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@ -1,9 +0,0 @@
server {
listen 80;
server_name localhost;
location / {
include proxy_params;
proxy_pass http://unix:/home/admin/advlabdb/gunicorn.sock;
}
}

14
advlabdb/scripts/setup/gunicorn.service
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@ -1,14 +0,0 @@
[Unit]
Description=Gunicorn - AdvLabDB
After=network.target
[Service]
User=admin
Group=www-data
Environment="PATH=/home/admin/advlabdb/.venv/bin"
WorkingDirectory=/home/admin/advlabdb
ExecStart=/home/admin/advlabdb/.venv/bin/gunicorn --workers 5 --bind unix:gunicorn.sock --umask 007 --log-file /var/log/advlabdb/gunicorn.log run:app
Restart=always
[Install]
WantedBy=multi-user.target

56
advlabdb/scripts/setup/logged_server_setup.py
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@ -5,15 +5,11 @@ No relative imports allowed in this file to be able to run server_setup.py witho
import sys
from pathlib import Path
from shared import LOCAL_BIN, LOGS_DIR, install_latest_pipx, poetry_update
sys.path.insert(0, str(Path(__file__).parent.parent.absolute()))
from terminal_utils import run, step
def main():
file_dir = Path(__file__).parent.absolute()
step("Update system packages")
run("sudo apt update")
run("sudo apt dist-upgrade")
@ -36,58 +32,6 @@ def main():
run("sudo ufw enable")
run("sudo ufw status")
step("Enable Gunicorn")
gunicorn_service_file = file_dir / "gunicorn.service"
run(f"sudo cp -v {gunicorn_service_file} /etc/systemd/system/")
run("sudo systemctl enable gunicorn")
step("Setup Nginx")
for dir_appendix in ("available", "enabled"):
run(f"sudo rm -v /etc/nginx/sites-{dir_appendix}/default")
nginx_conf_file = file_dir / "advlabdb.conf"
run(f"sudo cp -v {nginx_conf_file} /etc/nginx/sites-available/")
run("sudo ln -v -s /etc/nginx/sites-available/advlabdb.conf /etc/nginx/sites-enabled/")
run("sudo systemctl enable nginx")
step("Install pipx")
install_latest_pipx()
pipx_bin = LOCAL_BIN / "pipx"
step("Install Poetry")
run(f"{pipx_bin} install poetry")
# Place virtual environments in the root directory of the project
# The virtual environment will then be found in /home/admin/advlabdb/.venv
poetry_bin = LOCAL_BIN / "poetry"
run(f"{poetry_bin} config virtualenvs.in-project true")
step("Install Certbot")
run(f"{pipx_bin} install certbot")
run(f"{pipx_bin} inject certbot certbot-nginx")
step("Setup Certbot")
certbot_bin = LOCAL_BIN / "certbot"
run(f"sudo {certbot_bin} --nginx")
run(
f"echo \"0 0,12 * * * root python3 -c 'import random; import time; time.sleep(random.random() * 3600)' && sudo {certbot_bin} renew -q\" | sudo tee -a /etc/crontab"
)
step("Setup update cron jobs")
user_update_script = file_dir / "user_update.py"
user_update_log = LOGS_DIR / "user_update.log"
# Every Sunday at 04:00
run(f'echo "0 4 * * 0 admin python3 -u {user_update_script} &>> {user_update_log}" | sudo tee -a /etc/crontab')
root_update_script = file_dir / "root_update.py"
root_update_log = LOGS_DIR / "root_update.log"
# Every Sunday at 04:15
run(f'echo "15 4 * * 0 root python3 -u {root_update_script} &>> {root_update_log}" | sudo tee -a /etc/crontab')
step("Install latest Poetry packages")
poetry_update()
step("Deactivate the 'root' user")
run("sudo passwd -l root")

29
advlabdb/scripts/setup/server_setup.py
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@ -1,29 +0,0 @@
"""
No relative imports allowed in this file to be able to run server_setup.py without packages.
"""
import sys
from pathlib import Path
from shared import LOGS_DIR, REPO_DIR
sys.path.insert(0, str(Path(__file__).parent.parent.absolute()))
from terminal_utils import run
def main():
# Create logs directory
run(f"sudo mkdir -v -p {LOGS_DIR}")
run(f"sudo chown -R admin:admin {LOGS_DIR}")
log_file = LOGS_DIR / "server_setup.log"
# Start actual server setup script with logging
run(
f"python3 -u /home/admin/advlabdb/advlabdb/scripts/setup/logged_server_setup.py | tee {log_file}",
cwd=REPO_DIR,
)
if __name__ == "__main__":
main()

22
advlabdb/scripts/setup/shared.py
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@ -1,22 +0,0 @@
"""
No relative imports allowed in this file to be able to run server_setup.py without packages.
"""
import sys
from pathlib import Path
sys.path.insert(0, str(Path(__file__).parent.parent.absolute()))
from terminal_utils import run
LOCAL_BIN = Path("/home/admin/.local/bin/")
LOGS_DIR = Path("/var/log/advlabdb")
REPO_DIR = Path("/home/admin/advlabdb")
def install_latest_pipx():
run("pip install --user --upgrade pipx")
def poetry_update():
poetry_bin = LOCAL_BIN / "poetry"
run(f"{poetry_bin} update --no-dev", cwd=REPO_DIR)

2
podman/deploy.py
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@ -106,7 +106,7 @@ env_file = ADVLABDB_REPO_DIR / ".env"
if ADVLABDB_REPO_DIR.is_dir():
print("Pulling AdvLabDB repository.")
run(
"git pull",
"git pull origin main",
cwd=ADVLABDB_REPO_DIR,
check=True,
)