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ReCo.jl/src/shape.jl

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using StaticArrays: SVector, SMatrix
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using LinearAlgebra: eigvals, Hermitian
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function project_to_unit_circle(x, l)
φ = (x + l) * π / l
return SVector(cos(φ), sin(φ))
end
function project_back_from_unit_circle(θ, l)
x = θ * l / π - l
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return restrict_coordinate(x, l)
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end
function center_of_mass(args)
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x_proj_sum = SVector(0.0, 0.0)
y_proj_sum = SVector(0.0, 0.0)
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for p in args.particles
x_proj_sum += project_to_unit_circle(p.c[1], args.l)
y_proj_sum += project_to_unit_circle(p.c[2], args.l)
end
# Prevent for example atan(1e-16, 1e-15) != 0 with rounding
digits = 5
# No need for 1/N with atan
# If proj is (0, 0) then COM is 0 or L or -L. Here, 0 is choosen with θ = π
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if round(x_proj_sum[1]; digits=digits) == round(x_proj_sum[2]; digits=digits) == 0
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x_θ = π
else
x_θ = atan(x_proj_sum[2], x_proj_sum[1])
end
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if round(y_proj_sum[1]; digits=digits) == round(y_proj_sum[2]; digits=digits) == 0
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y_θ = π
else
y_θ = atan(y_proj_sum[2], y_proj_sum[1])
end
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return SVector{2}(project_back_from_unit_circle(θ, args.l) for θ in (x_θ, y_θ))
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end
function gyration_tensor(args)
COM = center_of_mass(args)
S11 = 0.0
S12 = 0.0
S22 = 0.0
for p in args.particles
c = p.c
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x = restrict_coordinate(c[1] - COM[1], args.l)
y = restrict_coordinate(c[2] - COM[2], args.l)
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S11 += x^2
S12 += x * y
S22 += y^2
end
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return Hermitian(SMatrix{2,2}(S11, S12, S12, S22))
end
function gyration_tensor_eigvals_ratio(args)
ev = eigvals(gyration_tensor(args)) # Eigenvalues are sorted
return ev[1] / ev[2]
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end